STRINGSTRING
ABB57953.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57953.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57953.1annotation not available (218 aa)    
Predicted Functional Partners:
ABB57952.1
Putative transmembrane transcriptional regulator; Anti-sigma factor (166 aa)
     
 
  0.850
ABB58034.1
annotation not available (196 aa)
   
     
  0.605
ABB57387.1
annotation not available (1807 aa)
       
 
  0.603
sigA1
RNA polymerase sigma factor SigA1; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (399 aa)
     
 
  0.587
ABB57879.1
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (398 aa)
     
 
  0.580
ABB56920.1
annotation not available (1536 aa)
           
  0.561
ABB58226.1
annotation not available (213 aa)
   
 
  0.532
ABB56694.1
annotation not available (304 aa)
   
 
  0.532
ABB58035.1
annotation not available (273 aa)
     
 
  0.523
ABB57955.1
annotation not available (283 aa)
 
          0.502
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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