STRINGSTRING
ABB57955.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57955.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57955.1annotation not available (283 aa)    
Predicted Functional Partners:
ABB57954.1
annotation not available (175 aa)
 
          0.898
ABB57956.1
annotation not available (97 aa)
              0.656
ABB57958.1
annotation not available (80 aa)
 
          0.559
ABB56170.1
annotation not available (200 aa)
   
          0.551
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (280 aa)
              0.529
ABB57953.1
annotation not available (218 aa)
 
          0.502
ABB57960.1
annotation not available (247 aa)
 
          0.452
petE
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (125 aa)
       
 
  0.404
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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