STRINGSTRING
ABB57962.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB57962.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB57962.1annotation not available (177 aa)    
Predicted Functional Partners:
ABB57964.1
annotation not available (449 aa)
              0.880
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) (348 aa)
              0.842
ABB56546.1
annotation not available (140 aa)
   
          0.784
chpX
annotation not available (379 aa)
   
          0.780
ABB58385.1
annotation not available (107 aa)
   
          0.777
ABB57649.1
annotation not available (168 aa)
   
          0.774
ABB56941.1
annotation not available (83 aa)
   
          0.771
ABB57481.1
annotation not available (153 aa)
   
          0.759
pcxA
Proton extrusion protein PcxA; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport (421 aa)
   
          0.756
ABB57161.1
annotation not available (73 aa)
   
          0.754
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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