STRINGSTRING
ABB58276.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB58276.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB58276.1annotation not available (520 aa)    
Predicted Functional Partners:
ABB56182.1
annotation not available (388 aa)
   
  0.946
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (882 aa)
              0.837
ABB58035.1
annotation not available (273 aa)
   
          0.622
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (181 aa)
              0.537
SEE0026
annotation not available (476 aa)
 
        0.533
psbZ
Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna (62 aa)
              0.520
ABB56828.1
annotation not available (181 aa)
   
          0.477
ABB56597.1
annotation not available (220 aa)
   
          0.455
ABB58228.1
annotation not available (376 aa)
   
          0.439
ABB58613.1
annotation not available (210 aa)
   
          0.422
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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