STRINGSTRING
ABB58294.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB58294.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB58294.1annotation not available (91 aa)    
Predicted Functional Partners:
ABB57387.1
annotation not available (1807 aa)
     
 
  0.704
ABB57846.1
annotation not available (977 aa)
   
 
  0.702
hisS
annotation not available (435 aa)
              0.663
ABB56992.1
16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (451 aa)
         
  0.616
ABB57879.1
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (398 aa)
       
 
  0.615
ABB56920.1
annotation not available (1536 aa)
         
  0.563
ABB56127.1
annotation not available (249 aa)
       
 
  0.526
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family (561 aa)
         
  0.517
ABB58414.1
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1196 aa)
     
   
  0.514
ABB56889.1
annotation not available (952 aa)
     
 
  0.511
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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