STRINGSTRING
ABB58394.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB58394.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB58394.1annotation not available (201 aa)    
Predicted Functional Partners:
ABB58393.1
annotation not available (123 aa)
              0.796
prfC
Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP (556 aa)
              0.608
ABB58230.1
annotation not available (163 aa)
   
          0.599
ABB56604.1
annotation not available (146 aa)
   
          0.553
ABB56461.1
annotation not available (179 aa)
   
          0.515
ABB56075.1
annotation not available (121 aa)
   
          0.465
ABB56996.1
annotation not available (195 aa)
   
          0.450
ABB57277.1
annotation not available (79 aa)
   
          0.409
ABB56929.1
annotation not available (265 aa)
   
          0.403
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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