STRINGSTRING
ABB58426.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB58426.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB58426.1annotation not available (183 aa)    
Predicted Functional Partners:
ABB58429.1
annotation not available (392 aa)
              0.882
ABB58428.1
Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (149 aa)
              0.882
ABB58427.1
annotation not available (175 aa)
              0.882
ABB58430.1
annotation not available (385 aa)
              0.743
ABB56437.1
annotation not available (332 aa)
 
          0.499
rsfS
Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (139 aa)
 
     
  0.495
ABB58425.1
annotation not available (83 aa)
              0.445
ABB58431.1
annotation not available (163 aa)
              0.429
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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