STRINGSTRING
ABB58465.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB58465.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB58465.1annotation not available (206 aa)    
Predicted Functional Partners:
ABB58464.1
annotation not available (172 aa)
              0.845
ABB58462.1
annotation not available (202 aa)
 
          0.828
ABB58463.1
annotation not available (306 aa)
              0.801
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (368 aa)
   
 
  0.609
ABB56992.1
16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (451 aa)
   
 
  0.607
ABB58461.1
annotation not available (1269 aa)
              0.531
ABB58460.1
annotation not available (381 aa)
     
      0.499
ABB58458.1
annotation not available (148 aa)
 
          0.441
ABB58459.1
annotation not available (216 aa)
   
        0.418
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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