STRINGSTRING
ABB58495.1 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"ABB58495.1" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB58495.1annotation not available (83 aa)    
Predicted Functional Partners:
ABB57383.1
annotation not available (222 aa)
   
          0.739
ABB58410.1
annotation not available (142 aa)
   
          0.724
SEN0021
annotation not available (85 aa)
   
          0.693
ABB58387.1
annotation not available (481 aa)
   
          0.635
ABB58061.1
Chromophore lyase CpcS/CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (193 aa)
   
          0.635
ABB56690.1
annotation not available (70 aa)
   
          0.634
ABB56142.1
annotation not available (185 aa)
   
          0.633
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (76 aa)
   
          0.605
ABB57532.1
annotation not available (186 aa)
   
          0.604
ABB56834.1
annotation not available (195 aa)
   
          0.595
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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