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SEB0053 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"SEB0053" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB0053annotation not available (462 aa)    
Predicted Functional Partners:
ABB58151.1
annotation not available (130 aa)
 
 
  0.774
ABB57468.1
Putative anti-sigma regulatory factor; Serine/threonine protein kinase (164 aa)
 
     
  0.738
ABB57387.1
annotation not available (1807 aa)
   
 
  0.696
nusB
Transcription antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons (213 aa)
 
          0.679
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (518 aa)
         
  0.674
SEB0052
annotation not available (53 aa)
              0.663
ABB57846.1
annotation not available (977 aa)
   
 
  0.630
argH
annotation not available (474 aa)
              0.607
ABB57998.1
annotation not available (452 aa)
           
  0.555
ABB58500.1
annotation not available (255 aa)
 
          0.539
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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