STRINGSTRING
SEA0049 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"SEA0049" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA0049annotation not available (298 aa)    
Predicted Functional Partners:
SEA0015
annotation not available (167 aa)
          0.930
psbW
annotation not available (124 aa)
              0.860
ABB57359.1
annotation not available (208 aa)
   
        0.661
rpmI
annotation not available (66 aa)
     
        0.628
chlD
Magnesium-chelatase subunit ChlD; Involved in chlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX (677 aa)
     
        0.619
ABB57120.1
annotation not available (265 aa)
     
        0.614
ABB58210.1
annotation not available (145 aa)
   
        0.468
ABB57972.1
annotation not available (150 aa)
   
        0.468
ABB57836.1
annotation not available (157 aa)
   
        0.468
ABB57760.1
annotation not available (196 aa)
   
        0.468
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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