STRINGSTRING
SEA0045 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"SEA0045" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA0045annotation not available (410 aa)    
Predicted Functional Partners:
SEA0046
annotation not available (300 aa)
 
          0.901
ABB57818.1
annotation not available (1568 aa)
   
 
  0.847
ABB56782.1
annotation not available (950 aa)
 
        0.821
ABB57311.1
annotation not available (230 aa)
 
 
  0.803
ABB57427.1
annotation not available (442 aa)
 
     
  0.791
ABB56956.1
annotation not available (419 aa)
 
 
  0.787
ABB57918.1
annotation not available (346 aa)
   
        0.786
ABB56890.1
annotation not available (319 aa)
 
          0.784
ABB58069.1
annotation not available (268 aa)
   
          0.783
ABB58422.1
annotation not available (486 aa)
   
          0.782
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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