STRINGSTRING
SEA0042 protein (Synechococcus elongatus PCC7942) - STRING interaction network
"SEA0042" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA0042annotation not available (230 aa)    
Predicted Functional Partners:
SEA0040
annotation not available (526 aa)
   
   
  0.767
ABB58509.1
annotation not available (188 aa)
   
   
  0.558
ABB58513.1
annotation not available (494 aa)
              0.530
SEA0044
annotation not available (197 aa)
              0.530
SEA0041
annotation not available (197 aa)
              0.516
SEA0045
annotation not available (410 aa)
           
0.453
SEA0046
annotation not available (300 aa)
              0.453
ABB57965.1
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (262 aa)
         
  0.452
ABB58481.1
annotation not available (264 aa)
         
  0.443
ABB58482.1
annotation not available (238 aa)
         
  0.411
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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