STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB58572.1Putative cytochrome C6-2. (115 aa)    
Predicted Functional Partners:
petJ-2
Cytochrome c553; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.
  
  
 
0.912
petJ
Cytochrome C6 soluble cytochrome f; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.
  
  
 
0.911
psbO
Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII.
  
   
 0.817
psbV
Cytochrome c550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.
  
   
 0.805
ABB56444.1
Hypothetical protein.
  
     0.746
ABB56951.1
Conserved hypothetical protein.
  
     0.745
ABB58573.1
Phage SPO1 DNA polymerase-related protein.
       0.737
ABB57781.1
Conserved hypothetical protein.
  
     0.715
ABB58047.1
Conserved hypothetical protein.
  
     0.715
ABB57558.1
Conserved hypothetical protein YCF49.
  
     0.698
Your Current Organism:
Synechococcus elongatus
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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