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srpB protein (Synechococcus elongatus PCC7942) - STRING interaction network
"srpB" - annotation not available in Synechococcus elongatus PCC7942
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srpBannotation not available (182 aa)    
Predicted Functional Partners:
srpA
Catalase-related peroxidase; Has an organic peroxide-dependent peroxidase activity (365 aa)
 
          0.626
pacL
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. In vivo, probably exports the calcium from the cytoplasm to the periplasm and the extracellular medium (921 aa)
   
   
  0.541
anL45
Carbonic anhydrase; Reversible hydration of carbon dioxide (192 aa)
              0.525
srpC
Probable chromate transport protein; May function in the active transport of chromate into the cell under sulfur-deficient conditions (393 aa)
              0.508
ABB57785.1
annotation not available (577 aa)
       
      0.444
Your Current Organism:
Synechococcus elongatus PCC7942
NCBI taxonomy Id: 1140
Other names: Anacystis nidulans R2, S. elongatus PCC 7942, Synechococcus elongatus PCC 7942, Synechococcus elongatus PCC7942, Synechococcus leopoliensis UTEX 2434, Synechococcus leopoliensis strain PCC 7942, Synechococcus sp. IAM M-200, Synechococcus sp. PCC 7942
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