STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2DZY1Uncharacterized protein. (283 aa)    
Predicted Functional Partners:
A0A1Y2DZZ3
Phosphatase tensin-type domain-containing protein.
 
      0.761
A0A1Y2DVB7
Reticulon-like protein.
   
 
 0.682
SEY1
Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
    
 
 0.631
A0A1Y2E2B7
Mitochondrial carrier domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.630
A0A1Y2DKB8
Nup133 N terminal like-domain-containing protein.
    
 
 0.563
A0A1Y2DNP2
Uncharacterized protein.
    
 
 0.526
A0A1Y2DPP8
Nuclear pore complex, component sec13; Belongs to the WD repeat SEC13 family.
      
 0.448
A0A1Y2DL85
Nucleoporin protein Ndc1-Nup.
    
 
 0.423
A0A1Y2EEP6
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
   
   0.417
A0A1Y2EL24
Protein YOP1.
   
 
 0.402
Your Current Organism:
Pseudomassariella vexata
NCBI taxonomy Id: 1141098
Other names: CBS 129021, Didymella vexata, Didymosphaeria vexata, Leiosphaerella vexata, P. vexata, WU 31333
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