STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM04246.1Hypothetical protein. (300 aa)    
Predicted Functional Partners:
BAM03463.1
Hypothetical protein.
  
     0.774
BAM03620.1
Hypothetical protein.
  
     0.773
BAM05000.1
Hypothetical protein.
  
     0.773
BAM03761.1
Hypothetical protein.
 
     0.765
BAM03715.1
Hypothetical membrane protein.
  
     0.637
BAM03334.1
Hypothetical protein; Belongs to the bacterial secretin family.
  
    0.633
BAM02307.1
Hypothetical protein.
  
     0.610
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
     0.603
pilM
Putative type IV pilus assembly protein PilM.
  
    0.601
BAM03591.1
Putative fimbrial protein.
  
     0.586
Your Current Organism:
Phycisphaera mikurensis
NCBI taxonomy Id: 1142394
Other names: P. mikurensis NBRC 102666, Phycisphaera mikurensis FYK2301M01, Phycisphaera mikurensis NBRC 102666, Phycisphaera mikurensis str. NBRC 102666, Phycisphaera mikurensis strain NBRC 102666, planctomycete FYK2301M01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.