STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE04558.1TPR repeat-containing protein. (784 aa)    
Predicted Functional Partners:
aglZ
Adventurous gliding motility protein AglZ.
 
 
 0.861
agmK
Adventurous gliding motility protein AgmK.
 
 
 0.826
AFE04718.1
Hypothetical protein.
 
  
 0.801
AFE04720.1
FHA domain/TonB domain-containing protein.
 
 
 0.799
AFE06445.1
TPR repeat-containing protein.
 
 
 
 0.792
AFE05099.1
Hypothetical protein.
 
  
 0.790
AFE06319.1
Hypothetical protein.
 
 
   0.790
AFE03879.1
Hypothetical protein.
 
   
 0.789
AFE05866.1
Hypothetical protein.
  
    0.785
AFE05955.1
TPR repeat-containing protein.
 
   0.784
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.