STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lipLactonizing lipase. (308 aa)    
Predicted Functional Partners:
lipB1
Lipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.
 
 
 0.977
AFE03862.1
Hypothetical protein.
  
 
  0.918
AFE06276.1
Putative diacylglycerol kinase.
     
 0.904
AFE03692.1
Hypothetical protein.
     
  0.900
AFE04488.1
Hypothetical protein.
     
  0.900
AFE06761.1
Alpha/beta hydrolase fold acetyltransferase.
     
  0.900
AFE06858.1
Hypothetical protein.
     
  0.900
AFE07891.1
Group 2 glycosyl transferase.
     
  0.900
lcfB
Putative long-chain-fatty-acid--CoA ligase.
    
 0.694
fadD3
Putative fatty-acid--CoA ligase fadD11.
     
 0.620
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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