STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJK84066.1PFAM: PspA/IM30 family; TIGRFAM: phage shock protein A. (222 aa)    
Predicted Functional Partners:
EJK84064.1
PFAM: PspC domain; TIGRFAM: phage shock protein C.
 
 
 0.998
EJK81778.1
Putative stress-responsive transcriptional regulator; PFAM: PspC domain.
  
 
 0.982
EJK84065.1
PFAM: Phage shock protein B; TIGRFAM: phage shock protein B.
 
   
 0.953
EJK83035.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, Response regulator receiver domain, His Kinase A (phosphoacceptor) domain, PAS fold; TIGRFAM: PAS domain S-box.
    
 
 0.937
EJK80230.1
PAS domain S-box; PFAM: Response regulator receiver domain, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, His Kinase A (phosphoacceptor) domain, PAS fold; TIGRFAM: PAS domain S-box.
    
 
 0.937
EJK78680.1
PAS domain S-box; PFAM: Response regulator receiver domain, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, His Kinase A (phosphoacceptor) domain, PAS fold; TIGRFAM: PAS domain S-box.
    
 
 0.937
EJK80730.1
PFAM: Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.814
EJK79365.1
Chemotaxis protein histidine kinase-like protein; PFAM: CheW-like domain, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, Signal transducing histidine kinase, homodimeric domain, Hpt domain.
    
 
 0.814
EJK84063.1
Hypothetical protein.
       0.751
EJK84068.1
Psp operon transcriptional activator PspF; PFAM: Bacterial regulatory protein, Fis family, Sigma-54 interaction domain; TIGRFAM: psp operon transcriptional activator PspF.
 
   
 0.742
Your Current Organism:
Sphingobium sp. AP49
NCBI taxonomy Id: 1144307
Other names: S. sp. AP49
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