STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJL50768.1Multidrug resistance efflux pump; PFAM: HlyD family secretion protein. (381 aa)    
Predicted Functional Partners:
EJL50766.1
Putative membrane protein; PFAM: Fusaric acid resistance protein family.
 
 
 0.976
EJL50722.1
Putative membrane protein; PFAM: Fusaric acid resistance protein family; overlaps another CDS with the same product name.
 
 
 0.907
EJL58461.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
  
 
 0.820
EJL50039.1
PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.812
EJL52518.1
PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.811
EJL50767.1
PFAM: Protein of unknown function (DUF1656).
       0.792
EJL57725.1
PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family.
  
 0.780
EJL58322.1
PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
  
  0.739
EJL56484.1
PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
  
  0.731
EJL53490.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
  
  0.721
Your Current Organism:
Rhizobium sp. CF122
NCBI taxonomy Id: 1144312
Other names: R. sp. CF122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.