node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRADO0639 | infB | BRADO0639 | BRADO0053 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.477 |
BRADO0639 | pnp | BRADO0639 | BRADO0057 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.882 |
BRADO0639 | rho | BRADO0639 | BRADO0197 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.448 |
BRADO0639 | rne | BRADO0639 | BRADO3511 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.644 |
BRADO0639 | rpoA | BRADO0639 | BRADO3090 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.617 |
BRADO0639 | rpoB | BRADO0639 | BRADO3054 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.624 |
BRADO1030 | infB | BRADO1030 | BRADO0053 | Putative ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.477 |
BRADO1030 | pnp | BRADO1030 | BRADO0057 | Putative ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.883 |
BRADO1030 | rho | BRADO1030 | BRADO0197 | Putative ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.457 |
BRADO1030 | rne | BRADO1030 | BRADO3511 | Putative ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | Putative ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.695 |
BRADO1030 | rpoA | BRADO1030 | BRADO3090 | Putative ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.617 |
BRADO1030 | rpoB | BRADO1030 | BRADO3054 | Putative ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.624 |
BRADO3233 | infB | BRADO3233 | BRADO0053 | Putative DEAD-box cold-shock protein, ATP-independent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the DEAD box helicase family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.477 |
BRADO3233 | pnp | BRADO3233 | BRADO0057 | Putative DEAD-box cold-shock protein, ATP-independent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.883 |
BRADO3233 | rho | BRADO3233 | BRADO0197 | Putative DEAD-box cold-shock protein, ATP-independent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the DEAD box helicase family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.457 |
BRADO3233 | rne | BRADO3233 | BRADO3511 | Putative DEAD-box cold-shock protein, ATP-independent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the DEAD box helicase family. | Putative ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.695 |
BRADO3233 | rpoA | BRADO3233 | BRADO3090 | Putative DEAD-box cold-shock protein, ATP-independent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.617 |
BRADO3233 | rpoB | BRADO3233 | BRADO3054 | Putative DEAD-box cold-shock protein, ATP-independent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the DEAD box helicase family. | RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.624 |
BRADO3549 | infB | BRADO3549 | BRADO0053 | Putative ATP-dependent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.477 |
BRADO3549 | pnp | BRADO3549 | BRADO0057 | Putative ATP-dependent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.883 |