STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO0179Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0102 family. (141 aa)    
Predicted Functional Partners:
rsmI
Putative methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.803
gshB
Glutathione synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic GSH synthase family.
       0.706
DprA
DNA processing chain A (DprA/Smf); Function of strongly homologous gene; factor.
 
    0.687
BRADO0583
Putative competence protein F (COMF); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
    0.668
BRADO0221
Putative enzyme (N-terminal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
  
 0.649
BRADO4122
Putative ComEC/Rec2 family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.509
BRADO0560
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.465
BRADO4880
Putative flagellar hook-associated protein 3 (HAP3, flgL protein) (Hook-filament junction protein); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
    0.465
BRADO0177
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.462
BRADO1831
Putative Response regulator, putative serine phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
    0.449
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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