STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutHHistidine ammonia-lyase (Histidase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the PAL/histidase family. (515 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase (Urocanase) (Imidazolonepropionate hydrolase); Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.999
hutI
Imidazolonepropionase (Imidazolone-5-propionate hydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
  
 0.992
hisD
Histidinol dehydrogenase (HDH); Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
 0.943
hutC
Histidine utilization repressor, transcriptional regulatory protein GntR family; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
  
 0.920
BRADO1602
Putative formiminoglutamate deiminase HutF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.911
BRADO4760
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.832
BRADO1544
Amidohydrolase family enzyme, putative Imidazolonepropionase; Function of strongly homologous gene; enzyme.
  
  
 0.809
BRADO6795
Putative agmatine ureohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the arginase family.
  
  
 0.732
BRADO5323
Arginase; Function of strongly homologous gene; enzyme; Belongs to the arginase family.
  
  
 0.723
bchD
Magnesium-chelatase 60 kDa subunit (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D); Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
    0.704
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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