STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO2718Putative penicillin-binding protein (mrcA-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (759 aa)    
Predicted Functional Partners:
BRADO3514
Putative membrane carboxypeptidase/penicillin-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
0.943
BRADO3826
Putative Serine-type D-Ala-D-Ala carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the peptidase S11 family.
  
 
 0.913
BRADO0522
Putative penicillin-binding protein pbpC/mrcB-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 
0.912
ftsI
Division-specific transpeptidase, penicillin-binding protein; Function of strongly homologous gene; enzyme.
 
 
 
 0.902
BRADO2716
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.821
BRADO2717
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.775
ftsW
Essential cell division protein (stabilizes FtsZ ring); Function of homologous gene experimentally demonstrated in an other organism; membrane component; Belongs to the SEDS family.
 
 
 
 0.774
BRADO4252
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.695
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
 
  
 0.695
BRADO6447
Putative metalloendopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   
 0.660
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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