STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ahpDAlkylhydroperoxidase, AhpD protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (181 aa)    
Predicted Functional Partners:
BRADO5376
Thioredoxin peroxidase (AhpC, Alkyl hydroperoxide reductase); Function of strongly homologous gene; enzyme.
 
  
 0.977
BRADO5380
Putative pyrophosphorylase modD (molybdenum transport component); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the NadC/ModD family.
      
 0.574
BRADO3235
Thioredoxin peroxidase (AhpC, Alkyl hydroperoxide reductase); Function of strongly homologous gene; enzyme.
 
  
 0.507
cysC
CysN/CysC bifunctional enzyme, ATP-sulfurylase large subunit and adenylyl sulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
   
    0.465
cysC-2
Putative CysN/CysC bifunctional enzyme: Sulfate adenylyltransferase (SAT) subunit 1 (N-terminal); Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
    0.465
BRADO2061
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.432
nifA
Mo/Fe nitrogenase specific transcriptional regulator, NifA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
     
 0.422
fixR
FixR protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      
 0.418
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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