STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pqqCPyrroloquinoline quinone biosynthesis protein C (Coenzyme PQQ synthesis protein C); Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. (259 aa)    
Predicted Functional Partners:
pqqB
Pyrroloquinoline quinone biosynthesis protein B (Coenzyme PQQ synthesis protein B/G); May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.
  
 0.996
pqqE
Pyrroloquinoline quinone biosynthesis protein E (Coenzyme PQQ synthesis protein E); Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
 
  
 0.938
pqqD
Coenzyme PQQ synthesis protein D (Pyrroloquinoline quinone biosynthesis protein D)(PqqD); Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.
 
  
 0.915
mxaF
Methanol dehydrogenase large subunit homolog; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.863
BRADO1462
Quinoprotein ethanol dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.788
BRADO0123
Putative Quinoprotein ethanol dehydrogenase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.778
BRADO5480
Putative Quinoprotein ethanol dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.777
BRADO1707
Putative Quinoprotein ethanol dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.775
BRADO3897
Putative Alcohol dehydrogenase (acceptor); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.771
BRADO5465
Putative ABC transporter (permease protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.716
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.