STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRADO6760Putative gluconolactonase (gnl); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (300 aa)    
Predicted Functional Partners:
gcd
Quinoprotein glucose dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.916
BRADO1396
Putative oxidoreductase with NAD(P)-binding domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.901
BRADO2605
Putative gluconolactonase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.737
BRADO6759
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.682
BRADO2479
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.661
BRADO5952
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.602
BRADO4771
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.564
BRADO3109
Putative UDP-glucose 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.470
BRADO1927
Putative ribose periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.456
BRADO4788
Putative sugar ABC transporter, substrate binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.429
Your Current Organism:
Bradyrhizobium sp. ORS278
NCBI taxonomy Id: 114615
Other names: B. sp. ORS 278, Bradyrhizobium sp. ORS 278
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