STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
desAPhosphatidylcholine desaturase; Sly1006770. (349 aa)    
Predicted Functional Partners:
AIE74217.1
Tocopherol cyclase; Sly1024390.
  
     0.747
AIE73805.1
Permeases of the major facilitator superfamily; Sly1025860.
  
     0.716
AIE74218.1
Homogentisate prenyltransferase; Sly1024400.
 
   
 0.640
AIE73081.1
Hypothetical protein; Sly2002400.
  
     0.616
desC,
Fatty acid desaturase; Sly1024050.
 
 
 0.615
desD
Linoleoyl-CoA desaturase; Sly1005950.
      
 0.614
AIE75480.1
Hypothetical protein; Sly1006760.
       0.572
AIE75355.1
Hypothetical protein; Sly1007970.
  
     0.555
AIE75221.1
Hypothetical protein; Sly1009310.
 
     0.549
thf1
Hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
    0.546
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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