STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dfrDrug sensory protein A; ORF_ID:sll0698. (663 aa)    
Predicted Functional Partners:
sll0699
Transposase; ORF_ID:sll0699.
     
 0.905
kdpD
Potassium-transporting ATPase D chain; Member of the two-component regulatory system KdpD/KdpE involved in the regulation of the kdp operon. KdpD may function as a membrane-associated protein kinase that phosphorylates KdpE in response to environmental signals (By similarity).
  
 
 0.895
sll1905
Hybrid sensory kinase; ORF_ID:sll1905.
 
 
0.892
slr0947
OmpR subfamily; ORF_ID:slr0947.
 
 
 0.891
slr0115
OmpR subfamily; ORF_ID:slr0115.
 
 
 0.828
slr1042
CheY subfamily; ORF_ID:slr1042.
 
   0.825
slr1783
NarL subfamily; ORF_ID:slr1783.
 
 
 0.817
sll0039
CheY subfamily; ORF_ID:sll0039.
  
   0.792
slr1888
ORF_ID:slr1888; hypothetical protein.
      
 0.788
sll0396
OmpR subfamily; ORF_ID:sll0396.
 
 
 0.784
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.