STRINGSTRING
ssr1238 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ssr1238" - Hypothetical protein in Synechocystis sp. PCC6803
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ssr1238Hypothetical protein (84 aa)    
Predicted Functional Partners:
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity) (1001 aa)
   
   
  0.858
nusA
N utilization substance protein; Participates in both transcription termination and antitermination (458 aa)
   
        0.782
rimP
Hypothetical protein; Required for maturation of 30S ribosomal subunits (176 aa)
   
   
  0.702
SYNGTS_1584
polyA polymerase (942 aa)
   
        0.517
slr0589
Hypothetical protein (184 aa)
   
          0.470
slr0236
Hypothetical protein (222 aa)
              0.464
pyrH
Uridine monophosphate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (240 aa)
   
        0.458
sll1063
Hypothetical protein (219 aa)
   
        0.440
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (718 aa)
   
        0.439
ribD
Riboflavin biosynthesis protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (368 aa)
              0.438
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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