STRINGSTRING
speB1 protein (Synechocystis sp. PCC6803) - STRING interaction network
"speB1" - Arginase in Synechocystis sp. PCC6803
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
speB1Arginase (306 aa)    
Predicted Functional Partners:
speA1
Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine (695 aa)
 
  0.996
speA2
Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine (659 aa)
 
  0.995
argF
Ornithine carbamoyltransferase chain f; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (308 aa)
   
  0.988
argD
N-acetylornithine aminotransferase (429 aa)
   
  0.974
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase (990 aa)
   
 
  0.947
argH
L-argininosuccinate lyase (461 aa)
     
 
  0.923
cad
Lysine decarboxylase (483 aa)
 
   
  0.902
speB2
Agmatine ureohydrolase (390 aa)
   
   
0.897
cphB
Hypothetical protein; Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides (271 aa)
           
  0.897
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (469 aa)
   
 
  0.871
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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