STRINGSTRING
sll0225 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0225" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0225Hypothetical protein (512 aa)    
Predicted Functional Partners:
sll0263
Hypothetical protein (239 aa)
 
          0.787
sll0224
Hypothetical protein (298 aa)
              0.787
pobA
Phenoxybenzoate dioxygenase (338 aa)
   
          0.744
sll1510
Hypothetical protein (246 aa)
 
          0.606
sll1473
Chromatic acclimation sensor CcaS/ScaS/Hik32 (753 aa)
   
          0.549
ycf4
Photosystem I assembly protein Ycf4; Seems to be required for the assembly of the photosystem I complex (188 aa)
              0.544
sll1849
Hypothetical protein (211 aa)
   
          0.543
sll1715
Hypothetical protein (157 aa)
   
          0.540
slr1298
Hypothetical protein (755 aa)
   
          0.501
sll0264
Hypothetical protein (396 aa)
   
          0.481
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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