STRINGSTRING
sgl0002 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sgl0002" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sgl0002Hypothetical protein (49 aa)    
Predicted Functional Partners:
petN
Cytochrome B6-f complex subunit PetN; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (29 aa)
         
  0.861
ssl2384
Hypothetical protein (57 aa)
           
  0.827
slr1970
Hypothetical protein (173 aa)
           
  0.821
slr1634
Hypothetical protein (124 aa)
           
  0.820
ssr3341
Hypothetical protein (70 aa)
           
  0.755
phoA
Alkaline phosphatase (326 aa)
              0.634
sll1638
Hypothetical protein (149 aa)
           
  0.628
slr1739
PsbW homolog (122 aa)
           
  0.533
slr0254
Hypothetical protein (266 aa)
              0.503
ycf37
Photosystem I assembly protein Ycf37 (175 aa)
           
  0.422
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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