STRINGSTRING
slr0254 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0254" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0254Hypothetical protein (266 aa)    
Predicted Functional Partners:
sll1571
Hypothetical protein (313 aa)
          0.871
slr1478
Hypothetical protein (317 aa)
 
        0.864
slr2013
Hypothetical protein (435 aa)
 
          0.862
slr1927
Hypothetical protein (406 aa)
 
          0.611
petN
Cytochrome B6-f complex subunit PetN; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (29 aa)
              0.596
morR
MorR protein (314 aa)
 
          0.539
sll0103
Hypothetical protein (420 aa)
   
          0.505
sgl0002
Hypothetical protein (49 aa)
              0.503
sll0163
Beta transducin-like protein (1693 aa)
   
          0.484
slr1977
Hypothetical protein (244 aa)
   
          0.448
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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