Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
sgl0002 | slr0254 | gene:10497578 | gene:10497580 | ORF_ID:sgl0002; unknown protein. | ORF_ID:slr0254; unknown protein. | 0.436 |
sgl0002 | ycf6 | gene:10497578 | gene:10497579 | ORF_ID:sgl0002; unknown protein. | Cytochrome b6-f complex subunit 8; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | 0.830 |
sll0543 | slr0254 | gene:10499995 | gene:10497580 | ORF_ID:sll0543; unknown protein. | ORF_ID:slr0254; unknown protein. | 0.452 |
sll1571 | slr0254 | gene:10498106 | gene:10497580 | ORF_ID:sll1571; unknown protein. | ORF_ID:slr0254; unknown protein. | 0.947 |
sll1571 | slr1415 | gene:10498106 | gene:10497599 | ORF_ID:sll1571; unknown protein. | ORF_ID:slr1415; unknown protein. | 0.775 |
sll1571 | slr1478 | gene:10498106 | gene:10499131 | ORF_ID:sll1571; unknown protein. | ORF_ID:slr1478; unknown protein. | 0.802 |
sll1571 | slr2013 | gene:10498106 | gene:10498123 | ORF_ID:sll1571; unknown protein. | ORF_ID:slr2013; unknown protein. | 0.787 |
slr0254 | sgl0002 | gene:10497580 | gene:10497578 | ORF_ID:slr0254; unknown protein. | ORF_ID:sgl0002; unknown protein. | 0.436 |
slr0254 | sll0543 | gene:10497580 | gene:10499995 | ORF_ID:slr0254; unknown protein. | ORF_ID:sll0543; unknown protein. | 0.452 |
slr0254 | sll1571 | gene:10497580 | gene:10498106 | ORF_ID:slr0254; unknown protein. | ORF_ID:sll1571; unknown protein. | 0.947 |
slr0254 | slr1415 | gene:10497580 | gene:10497599 | ORF_ID:slr0254; unknown protein. | ORF_ID:slr1415; unknown protein. | 0.774 |
slr0254 | slr1478 | gene:10497580 | gene:10499131 | ORF_ID:slr0254; unknown protein. | ORF_ID:slr1478; unknown protein. | 0.937 |
slr0254 | slr2013 | gene:10497580 | gene:10498123 | ORF_ID:slr0254; unknown protein. | ORF_ID:slr2013; unknown protein. | 0.793 |
slr0254 | ycf6 | gene:10497580 | gene:10497579 | ORF_ID:slr0254; unknown protein. | Cytochrome b6-f complex subunit 8; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | 0.516 |
slr1415 | sll1571 | gene:10497599 | gene:10498106 | ORF_ID:slr1415; unknown protein. | ORF_ID:sll1571; unknown protein. | 0.775 |
slr1415 | slr0254 | gene:10497599 | gene:10497580 | ORF_ID:slr1415; unknown protein. | ORF_ID:slr0254; unknown protein. | 0.774 |
slr1415 | slr1478 | gene:10497599 | gene:10499131 | ORF_ID:slr1415; unknown protein. | ORF_ID:slr1478; unknown protein. | 0.773 |
slr1415 | slr2013 | gene:10497599 | gene:10498123 | ORF_ID:slr1415; unknown protein. | ORF_ID:slr2013; unknown protein. | 0.789 |
slr1478 | sll1571 | gene:10499131 | gene:10498106 | ORF_ID:slr1478; unknown protein. | ORF_ID:sll1571; unknown protein. | 0.802 |
slr1478 | slr0254 | gene:10499131 | gene:10497580 | ORF_ID:slr1478; unknown protein. | ORF_ID:slr0254; unknown protein. | 0.937 |
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