STRINGSTRING
slr1103 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1103" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1103Hypothetical protein (706 aa)    
Predicted Functional Partners:
sll0779
PleD gene product homolog (884 aa)
 
 
 
  0.979
sll0267
Hypothetical protein (1578 aa)
 
 
 
0.924
slr1104
Hypothetical protein (613 aa)
 
   
0.829
glnB
Nitrogen regulatory protein P-II; P-II indirectly controls the transcription of the GS gene (glnA). P-II prevents NR-II-catalyzed conversion of NR-I to NR-I-phosphate, the transcriptional activator of glnA. When P-II is phosphorylated, these events are reversed. In nitrogen-limiting conditions, when the ratio of Gln to 2-ketoglutarate decreases, P- II is phosphorylated which allows the deadenylation of glutamine synthetase (GS), thus activating the enzyme (By similarity) (112 aa)
   
 
  0.827
sll1170
Hypothetical protein (527 aa)
 
   
  0.807
SYNGTS_0455
Hypothetical protein (464 aa)
 
   
  0.804
SYNGTS_0248
Hypothetical protein (585 aa)
   
   
  0.804
slr1657
Hypothetical protein (275 aa)
 
          0.772
slr0829
PleD gene product homolog (829 aa)
     
  0.770
slr0115
OmpR subfamily protein RpaA/Ycf27/Crr31/Rre31 (241 aa)
 
  0.713
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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