STRINGSTRING
ccmN protein (Synechocystis sp. PCC6803) - STRING interaction network
"ccmN" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccmNHypothetical protein (241 aa)    
Predicted Functional Partners:
ccmM
Carbon dioxide concentrating mechanism protein CcmM (669 aa)
 
 
 
  0.999
ccmL
Carbon dioxide concentrating mechanism protein CcmL (100 aa)
         
  0.963
slr0436
Carbon dioxide concentrating mechanism protein CcmK (297 aa)
 
     
  0.899
ccmK2
Carbon dioxide concentrating mechanism protein CcmK; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (103 aa)
         
  0.890
ccmK3
Carbon dioxide concentrating mechanism protein CcmK; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (103 aa)
 
     
  0.874
rbcX
Possible Rubisco chaperonin (138 aa)
   
     
  0.834
ccmK4
Carbon dioxide concentrating mechanism protein CcmK; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (112 aa)
         
  0.830
slr1347
Carbonic anhydrase; Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation (311 aa)
           
  0.826
sll0659
Hypothetical protein (522 aa)
   
     
  0.815
SYNGTS_2307
Carbonic anhydrase; Reversible hydration of carbon dioxide (263 aa)
           
  0.807
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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