STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltDNADH-glutamate synthase small subunit; ORF_ID:sll1027. (494 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase (ferredoxin); ORF_ID:sll1502.
 0.999
gltB-2
Ferredoxin-dependent glutamate synthase; ORF_ID:sll1499; Belongs to the glutamate synthase family.
 0.999
glnA
Glutamate--ammonia ligase; Involved in nitrogen metabolism via ammonium assimilation. Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.
  
 
 0.962
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
  
 
 0.957
hoxF
Hydrogenase subunit; ORF_ID:sll1221.
 
  
 0.942
glnN
Glutamate--ammonia ligase; ORF_ID:slr0288; Belongs to the glutamine synthetase family.
    
 0.942
gdhA
Glutamate dehydrogenase (NADP+); Catalyzes the reversible oxidative deamination of glutamate to alpha-ketoglutarate and ammonia.
  
 0.942
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; ORF_ID:sll1561; Belongs to the aldehyde dehydrogenase family.
   
 0.934
glmS
L-glutamine:D-fructose-6-P amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.923
hoxU
Hydrogenase subunit; ORF_ID:sll1223.
    
 0.917
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.