STRINGSTRING
ank protein (Synechocystis sp. PCC6803) - STRING interaction network
"ank" - Erythroid ankyrin in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankErythroid ankyrin (441 aa)    
Predicted Functional Partners:
sll1574
Hypothetical protein (103 aa)
   
  0.920
spkA
Serine/threonine protein kinase; Protein kinase that regulates cellular motility via phosphorylation of membrane proteins (416 aa)
   
  0.911
slr0152
Serine/threonine protein kinase (631 aa)
 
  0.910
spkC
Serine/threonine kinase (535 aa)
   
  0.910
spkD
Eukaryotic protein kinase (505 aa)
   
  0.910
slr0868
Hypothetical protein (101 aa)
   
  0.910
spkF
Protein kinase PknA (495 aa)
   
  0.910
slr1110
Hypothetical protein (192 aa)
              0.859
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (240 aa)
     
      0.855
katG
Catalase hpi; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity. Displays also NADH oxidase, isoniazid hydrazine lyase and isonicotinoyl-NAD synthase activity (754 aa)
     
 
  0.839
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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