STRINGSTRING
slr1303 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1303" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1303Hypothetical protein (410 aa)    
Predicted Functional Partners:
slr0865
Hypothetical protein (337 aa)
   
  0.981
slr1301
Hypothetical protein (535 aa)
         
  0.959
slr1302
Hypothetical protein (409 aa)
         
  0.928
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 (358 aa)
           
  0.890
slr0199
Hypothetical protein (304 aa)
 
   
  0.668
sll1734
Hypothetical protein (431 aa)
           
  0.664
ndhD6
Monovalent cation/H+ antiporter subunit D (495 aa)
           
  0.629
ndhD5
Monovalent cation/H+ antiporter subunit D (487 aa)
           
  0.626
slr0844
NADH dehydrogenase subunit 5; NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (681 aa)
           
  0.521
ssl3291
Hypothetical protein (94 aa)
 
          0.515
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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