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rfbF protein (Synechocystis sp. PCC6803) - STRING interaction network
"rfbF" - alpha-D-glucose-1-phosphatecytidylyltransferase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbFalpha-D-glucose-1-phosphatecytidylyltransferase (256 aa)    
Predicted Functional Partners:
rfbG
CDP-glucose-4,6-dehydratase (360 aa)
 
 
  0.999
SYNGTS_0327
dTDP-6-deoxy-L-mannose-dehydrogenase (189 aa)
   
  0.979
SYNGTS_1012
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (855 aa)
     
  0.966
sll1356
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity) (849 aa)
     
  0.966
SYNGTS_3053
Phosphoglucomutase (567 aa)
   
    0.966
glgC
Glucose-1-phosphate adenylyltransferase; Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans (439 aa)
         
  0.961
SYNGTS_0324
ABC transporter (430 aa)
         
  0.954
sll1528
Hypothetical protein (996 aa)
   
  0.915
slr1610
Hypothetical protein (433 aa)
 
     
  0.901
SYNGTS_2019
dTDP-4-dehydrorhamnose 3,5-epimerase (182 aa)
   
  0.900
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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