STRINGSTRING
rfbG protein (Synechocystis sp. PCC6803) - STRING interaction network
"rfbG" - CDP-glucose-4,6-dehydratase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbGCDP-glucose-4,6-dehydratase (360 aa)    
Predicted Functional Partners:
rfbF
alpha-D-glucose-1-phosphatecytidylyltransferase (256 aa)
 
 
  0.999
SYNGTS_0327
dTDP-6-deoxy-L-mannose-dehydrogenase (189 aa)
   
 
  0.979
SYNGTS_0324
ABC transporter (430 aa)
   
   
  0.962
sll1528
Hypothetical protein (996 aa)
   
 
  0.926
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
   
 
  0.924
SYNGTS_2019
dTDP-4-dehydrorhamnose 3,5-epimerase (182 aa)
   
 
  0.900
slr1610
Hypothetical protein (433 aa)
         
  0.893
slr2111
Hypothetical protein (157 aa)
   
 
  0.864
dpm1
Dolichyl-phosphate-mannose synthase (390 aa)
   
 
  0.858
yefA
GDP-D-mannose dehydratase (320 aa)
   
0.856
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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