STRINGSTRING
slr1618 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1618" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1618Hypothetical protein (261 aa)    
Predicted Functional Partners:
rfbE
Perosamine synthetase (378 aa)
              0.836
slr1616
Carbamoyl phosphate synthase-like-protein (341 aa)
              0.833
slr1617
Hypothetical protein (411 aa)
              0.829
slr1619
Hypothetical protein (249 aa)
              0.760
slr1614
Hypothetical protein (101 aa)
 
          0.697
slr1071
Hypothetical protein (268 aa)
 
          0.414
sll1761
Hypothetical protein (204 aa)
   
          0.414
slr1062
Hypothetical protein (115 aa)
              0.413
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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