STRINGSTRING
rfbU protein (Synechocystis sp. PCC6803) - STRING interaction network
"rfbU" - Mannosyltransferase B in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbUMannosyltransferase B (367 aa)    
Predicted Functional Partners:
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
   
  0.957
slr1063
Hypothetical protein (689 aa)
 
 
  0.922
gmd
GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (362 aa)
   
   
  0.851
SYNGTS_2253
Glucose-1-phosphate thymidylyltransferase (365 aa)
       
  0.801
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (770 aa)
     
 
  0.792
dpm1
Dolichyl-phosphate-mannose synthase (390 aa)
   
 
  0.770
rfbF
alpha-D-glucose-1-phosphatecytidylyltransferase (256 aa)
   
  0.747
epsB
Exopolysaccharide export protein (756 aa)
   
   
  0.742
slr0537
Hypothetical protein (333 aa)
 
 
  0.711
SYNGTS_0343
UDP-glucose-4-epimerase (340 aa)
   
   
  0.705
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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