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SYNGTS_0356 protein (Synechocystis sp. PCC6803) - STRING interaction network
"SYNGTS_0356" - UDP-glucose-4-epimerase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGTS_0356UDP-glucose-4-epimerase (105 aa)    
Predicted Functional Partners:
slr1299
UDP-glucose dehydrogenase (453 aa)
   
 
  0.980
sqdB
Sulfolipid biosynthesis protein SqdB (383 aa)
         
    0.900
sll1971
Hypothetical protein (404 aa)
   
   
  0.870
slr1084
Hypothetical protein (146 aa)
         
  0.858
SYNGTS_0343
UDP-glucose-4-epimerase (340 aa)
 
   
 
0.853
SYNGTS_1375
UDP-glucose 4-epimerase (338 aa)
 
   
 
0.816
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
   
 
  0.815
sll1528
Hypothetical protein (996 aa)
   
   
  0.805
slr1085
Hypothetical protein (424 aa)
   
   
  0.804
SYNGTS_2253
Glucose-1-phosphate thymidylyltransferase (365 aa)
       
  0.804
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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