STRINGSTRING
slr1085 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1085" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1085Hypothetical protein (424 aa)    
Predicted Functional Partners:
slr1084
Hypothetical protein (146 aa)
 
   
  0.997
epsB
Exopolysaccharide export protein (756 aa)
 
   
  0.968
slr0977
ABC transporter (276 aa)
   
   
  0.963
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
   
  0.956
sll1685
Heme-binding proton extrusion protein PcxA; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake (By similarity) (393 aa)
           
  0.891
slr0976
Hypothetical protein (242 aa)
         
  0.846
SYNGTS_0356
UDP-glucose-4-epimerase (105 aa)
   
   
  0.804
SYNGTS_2253
Glucose-1-phosphate thymidylyltransferase (365 aa)
       
  0.797
SYNGTS_0343
UDP-glucose-4-epimerase (340 aa)
   
   
  0.793
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (770 aa)
     
 
  0.792
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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