STRINGSTRING
sll0654 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0654" - Alkaline phosphatase in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0654Alkaline phosphatase (1409 aa)    
Predicted Functional Partners:
nucH
Extracellular nuclease (1879 aa)
 
     
0.759
sll0328
Hypothetical protein (139 aa)
           
  0.715
slr1968
Hypothetical protein (934 aa)
           
  0.715
slr2123
D-isomer specific 2-hydroxyacid dehydrogenase family protein (318 aa)
           
  0.715
slr0872
Hypothetical protein (372 aa)
           
  0.715
sll1864
Chloride channel protein (899 aa)
     
 
  0.686
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (770 aa)
     
      0.666
SYNGTS_1584
polyA polymerase (942 aa)
   
 
  0.663
nadE
NH(3)-dependent NAD(+) synthetase; Can use both glutamine or ammonia as a nitrogen source (558 aa)
   
 
    0.656
sll0051
Hypothetical protein (159 aa)
       
    0.643
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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