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ycf45 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ycf45" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycf45Hypothetical protein (589 aa)    
Predicted Functional Partners:
slr1515
Hypothetical protein (474 aa)
   
          0.699
slr0013
Hypothetical protein (175 aa)
   
          0.679
preA
Solanesyl diphosphate synthase; Possible role in synthesis of the nonaprenyl side chain of plastoquinone or in synthesis of other prenyl chains such as undekaprenyl pyrophosphate (323 aa)
 
   
  0.667
sll0752
Hypothetical protein (452 aa)
           
  0.629
ycf22
Hypothetical protein (456 aa)
           
  0.629
slr0816
Hypothetical protein (167 aa)
   
          0.602
sll0638
Hypothetical protein (458 aa)
              0.583
slr1676
Hypothetical protein (163 aa)
   
        0.570
sll0284
Hypothetical protein (579 aa)
   
          0.555
slr0250
Hypothetical protein (178 aa)
   
          0.555
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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