STRINGSTRING
ssr2699 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ssr2699" - Transposase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssr2699Transposase (82 aa)    
Predicted Functional Partners:
ssl1922
Transposase (83 aa)
 
          0.637
sll0048
Hypothetical protein (312 aa)
   
          0.524
slr1522
Transposase (358 aa)
   
          0.464
ssr2898
Transposase (68 aa)
 
          0.452
sll1319
Hypothetical protein (329 aa)
   
          0.449
sll0249
Hypothetical protein (251 aa)
   
          0.447
slr0099
Transposase (339 aa)
   
          0.442
slr1442
Hypothetical protein (285 aa)
   
          0.437
sll0428
Hypothetical protein (350 aa)
   
          0.433
slr0460
Transposase (157 aa)
   
          0.428
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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