STRINGSTRING
SYNGTS_0436 protein (Synechocystis sp. PCC6803) - STRING interaction network
"SYNGTS_0436" - Virulence associated protein C in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGTS_0436Virulence associated protein C (83 aa)    
Predicted Functional Partners:
vapB
Virulence associated protein B (75 aa)
 
 
 
  0.991
sll0406
Hypothetical protein (161 aa)
           
  0.940
ssr1114
Hypothetical protein (86 aa)
           
  0.930
slr0195
Hypothetical protein (183 aa)
           
  0.925
slr1767
Hypothetical protein (112 aa)
           
  0.925
ssr2962
Hypothetical protein (74 aa)
           
  0.925
slr0664
Hypothetical protein (120 aa)
           
  0.872
clpP2
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (201 aa)
           
  0.820
SYNGTS_2367
Probable transcription regulator (133 aa)
   
          0.778
clpP3
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (202 aa)
           
  0.759
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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